Advancements in Life Sciences, volume 7, issue 4
Published online: 31 August 2020
ISSN 2310-5380
IN THIS ISSUE
Correspondence
MinION as a Teaching tool in a Graduate course in Pakistan
Wahid Ullah, Ikram Ullah, Gohar Rahman, Nasir Khan, Khawar Sohail, Muhammad Ilyas, pages 190-192
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Review Articles
The role of opioid and nitrergic systems in dual modulation of seizure susceptibility
Muhammad Imran Khan, Farid Ullah Shah, Abdul Wahab, Vahid Nikoui, Ahmad Reza Dehpour, pages 193-201
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Potential of Camel Dung as Promising Organic Manure in Saudi Arabia
Eitimad H. Abel Rahman, Fawzia S. Alzahrani, Abdel Moneim E. Sulieman, pages 202-207
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Life after COVID-19 outbreak: Expectations and thoughts
Aiman Zahra, Tanveer Hussain, Sikander Khan Sherwani, pages 208-214
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Dog Coat Colour Genetics: A Review
Rashid Saif, Ali Iftekhar, Fatima Asif, Mohammad Suliman Alghanem, pages 215-224
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CRISPR/Cas9 system: Current applications and future potential in rice breeding
Anh Phu Nam Bui, pages 225-231
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Short Communications
Monozygotic and Dizygotic Twins Differences in Fingerprint Patterns of Swat District
Methods: This was a prospective cross-sectional study carried out among 30 pairs of twins including 17 pair of monozygotic twins and 13 pair of dizygotic twins. After taking an informed expressed consent, the participants were asked to press their individual fingers on the stamp pad. They were asked to then put and roll the stamped finger onto an A4 size paper on which blocks for each finger were already made. Both left and right hands were fingerprinted and with the help of magnifying glass, different types were identified including Arches, Composite type, Loops and Whorls. SPSS software was used for data analysis.
Results: There was 7.6% of Arch type, 6.1% of tented arches, 1.5% of plain arches, 62.32% of loops, 6.66% of double loop, and 3.83% of central pocket loop, 44.83% of ulnar loop, 7% of radial loop, 0.83% of accidental loop, 29.93% of whorls, 9% of plain whorl and 20.1% of central the pocket whorl.
Conclusion: When the left and right thumbs are compared with each other using eight (8) points, there are matches on the first six (6) points, matching percentage for each of these pairs of fingers is 75%. But when the both fingers were rotated on 180° and compared, the matching percentage was 87.5%. These 8 points fingerprinting can be used to distinguish twins.
Murad Ali Rahat, Adil Shah Khan, Romana Bibi, Muhammad Haris, Fazal Akbar, Muzafar Shah, Akhtar Rasool, Muhammad Israr, pages 232-236
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Methods: Three hundred and fourteen (314) high school individuals of both genders were screened for color vision deficiency using pseudoisochromatic Ishihara Plates. Consanguinity of parents were also recorded. Frequency of color vision deficiency over entire sample was used to calculate prevalence. Chi-square is used to see association between color vision deficiency and consanguinity.
Result: Prevalence of CVD among males and females were 5.32% and 2.06%. Prevalence of consanguinity among parents of participants were 73.9%.
Conclusion: Study showed prevalence of CVD among males as comparable to already reported but among females the rate is relatively higher. Rate of consanguinity among study population is also higher than previously reported ones.
Colour Vision Deficiency and Consanguinity in Pakistani Pukhtoon Population
Mian Sahib Zar, Muhammad Shoaib Akhtar, Abdul Rehman Haris, Muhammad Aslamkhan, pages 237-239
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Full Length Research Articles
Exposure to low concentrations of heavy metals alone and in combination induces histopathological and genotoxic effects in fish (Labeo rohita)
Methods: A total of 120 active, healthy, free from disease and internal parasites fish having three months of age were procured from local fish breeding center and were kept in glass aquarium having 100 liter water. After two weeks of acclimatization, fish were arbitrarily distributed and placed in different eight groups (A-H). Prior to start of experiment, acute toxicity of various heavy metals alone such as lead, cadmium, chromium and in combination (Pb +Cr), (Cr+Cd), (Cd+Pb) and (Pb+Cr+Cd) mixture were determined in-term of 96-h LC50 and lethal doses for Labeo rohita. After assessment of acute toxicity, all the fish were exposed to three sub-lethal concentrations (5, 7 and 9%) of heavy metals alone and in combinations for a period of 30 days in triplicate experiments.
Results: Different clinical ailments like, increased surface breathing, loss of coordination, rapid opercular movement, erratic swimming, air gulping, jerking movement and tremors were noted in fish. Histopathological observations of gills of various fish exhibited severe microscopic alterations. Results on micronucleus assay exhibited increased frequency of formation of micronuclei in red blood cells, while comet assays showed significantly increased DNA damage in peripheral erythrocytes in-term of arbitrary units of comets, average percentile rate of damaged cell and genomic damage index.
Conclusion: From the results of our experimental study, it can be concluded that fresh water fish are useful and reliable bio-indicators of heavy metal toxicity. Micronucleus and comet assays showed that heavy metals alone and in combination induced DNA damage in fish.
Asma Yamin, Saima Naz, Riaz Hussain, Tuba Rehman, Ansar Shaheen, Ahmad Manan Mustafa Chatha, Abdul Ghaffar, Muhammad Ismail Abbas, Muhammad Sajjad Moazzam, pages 240-246
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An investigation on permethrin-treated military uniforms against diurnal mosquitoes under field conditions
Mehdi Khoobdel, Morteza Akbari, Ali-Ashraf Aivazi, Seyed Hassan Moosa-Kazemi, Hemn Yousefi, Mohamad Reza Akbari, Davood Keshavarzi, Mohammad Moradi, pages 247-251
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Methods: In this study, one of the most common uniforms used in the Iranian military was treated by permethrin (0.125 mg. permethrin ai/cm2) and evaluated against the natural population of day-biting mosquitoes, in the rural area with Eight participants, three of them put on the treated uniforms and the other one of them wore the untreated uniforms and Four officers were also appointed as collectors.
Results: The average number of bites in those who wore untreated uniforms (control) was 1.8/min/person (107.8/hr), while it was 0.16 (9.83/hr) for treated uniforms. The protection of treated uniforms was about 91%. The knockdown rate for Culex and Aedes mosquitoes was 95.92% and 94.44%, respectively. The mortality rate in Culex was 98.59% and 98.61% in Aedes mosquitoes when exposed to treated uniforms.
Conclusion: In this study, military uniforms impregnated with permethrin showed significant protection against the bites of Culex and Aedes mosquitoes. This intervention can be used to protect military personnel from the bites of Culex and Aedes these mosquitoes and to reduce the diseases transmitted by these mosquitoes.
Effects of Carica Papaya Leaf Extract on Blood Hematology, Serum Biochemistry and Immune Response of Broilers
Muhammad Khalid Bashir, Muhammad Ashraf, Shahid Ur-Rehman, Sadia Razzaq, Muhammad Qamar Bilal, Sayeda Mariam, Madiha Tabbasum, pages 252-256
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Methods: In this experiment, 180 one-day old chicks were randomly distributed into 6 treatments. Each treatment was divided into 3 replicates having 10 chicks each. Feed was offered ad-libitum to broilers. Six treatments; G1 {(basal diet + antibiotic growth promoter (enramycin) + coccidiostat (salinomycin)}, G2 (basal diet without antibiotic growth promotor and coccidiostat), G3 (basal diet + 0.5% papaya extract), G4 (basal diet + 1.0% papaya extract), G5 (basal diet + 1.5% papaya extract) and G6 (basal diet + 2.0% papaya extract) were designed. Blood samples were taken for serum biochemistry, hematology and titer against Newcastle disease. Data were analyzed using analysis of variance technique by completely randomized design using SAS and Tukey’s test were used for comparison of means.
Results: Birds received various level of papaya extract had no effect on serum biochemistry and hematology parameters except triglyceride levels which were significantly lower in G2 (15.00±15.00, commercial diet) and G6 (17.43±9.87, commercial diet + 2% papaya extract) at 17th day and 35th day where it failed to show significant difference. However, Newcastle disease and infectious bursal disease titers were not affected by the treatments.
Conclusion: It can be concluded that papaya leaf extract may be used in broiler diet as commercial antibiotics replacement.
Development of a diagnostic scar marker for Vibrio shilonii caused acute hepatopancreatic necrosis disease in whiteleg shrimp
Hoang Tan Quang, Pham Thi Diem Thi, Tran Thuy Lan, Nguyen Duc Huy, Nguyen Duy Quynh Tram, Nguyen Thi Thu Lien, pages 257-263
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Methods: Pathogen Vibrio spp. were isolated from shrimps and fishes, and were identified by 16S rRNA sequencing. Genetic diversity of Vibrio strains was analysis by RAPD technique. Specific PCR product for V. shilonii was cloned and sequenced. SCAR marker was developed from specific PCR product.
Result: Twenty random primers were evaluated for RAPD to identify DNA polymorphisms between Vibrio species. The random primer OPN-06 generated a 468-bp DNA fragment specific for V. shilonii. This was then converted into a sequence-characterized amplified region (SCAR) marker designated N6-441.
Conclusion: Specific primers (Vshi-441F/Vshi-441R) amplified a unique DNA fragment in all V. shilonii isolates but not in the other Vibrio spp. This PCR assay showed significantly sensitive to the target DNA and reliably for the amplification the V. shilonii genome.
Biocontrol of MRSA and E. coli using bacteriophages from cow manure
Nimerta Kumari, Bushra Bano Patoli, Atif A Patoli, Shagufta Jabeen, pages 264-269
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Method: E. coli and S. aureus isolates of clinical origin were sub-cultured on MacConkey’s and Mannitol salt agar media, respectively. To confirm the Methicillin resistance in S. aureus, mecA gene was detected by the PCR using gene specific forward and reverse primers. The bacteriophages were isolated using enrichment procedure from cow manure. Their antibacterial and anti-biofilm formation activity was determined through the inhibition of bacterial growth and decrease in the absorbance of Crystal Violet through biofilm inhibition assay, respectively.
Results: The isolated phages showed clear plaque formation against MRSA and E. coli species. The time-dependent lytic assay showed a sharp decline in OD600 of MRSA and E. coli after one hour incubation with the phages. Biofilm inhibition was indicated by a decrease in the absorbance (OD595) of CV in a microtiter well plate
Conclusion: This is perhaps the first study to isolate phages from cow manure at local region and demonstrate their lytic efficiency against MRSA and E. coli, with the ultimate aim to use them as a promising biocontrol agent against antibiotic resistant pathogens.
Assessing the life quality in a Moroccan population of diabetics by the General Quality of Life Questionnaire SF36
Fatima Zahra Kehailou, Mohammed Jabari, Ali Labriji, Souad El Amrani, Said Aatil, Houriya Mestaghanmi, pages 270-276
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Methods: A cross-sectional study was conducted in 2019 in the Hygiene Service of the Sidi-Othmane district (Casablanca) in 526 diabetic patients. Quality of life was estimated using the SF-36 questionnaire to determine factors that affect mental or physical health. We used Pearson's correlation test for continuous variables and ANOVA for discontinuous variables.
Results: Our patients have an average of life quality considering PCS and MCS respectively (38.47 ± 9.28; 41.15 ± 10.55). Association analyses showed on the one hand associations between the PCS and the gender (p = 0.0001), professional activity (p = 0.0001), marital status (p = 0.0001) and with chronic complications (p = 0.0001). On the other hand, between physical activity and PCS (p = 0.0001) and with MCS (p = 0.0001), between the level of instruction and the PCS and MCS dimensions respectively (p = 0.0001; p = 0.011) between acute complications and PCS and MCS dimensions respectively (p = 0.0001; p = 0.001). The correlation study showed inverse correlations between PCS and age (p = 0.0001), the diabetes duration (p = 0.0001), HbA1c (p = 0.037), and BMI (p = 0.008), and between MCS, and BMI (p = 0.0001).
Conclusion: The presence of one of these factors (female, advanced age, high diabetes duration, complications, and unbalanced diabetes, low level of education, physical inactivity, and professional inactivity) leads to poor life quality.
Assessment of genetic diversity and genetic characterization of Nili Ravi buffalo breed utilizing microsatellite markers
Atia Bukhari, Naveed Ahmed, Fizza Khan, Muhammad Shafique, Asif Suleman Sahi, pages 277-280
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Methods: In present study genetic diversity of Nili Ravi buffalo population was assessed. A total of 196 unrelated Nili Ravi buffaloes from Punjab, Pakistan were sampled in this study. Genomic DNA was extracted and subjected to amplification using FAO recommended 12 Short Tandem Repeats (STRs) microsatellite markers. Among 12 microsatellite loci, 11 were successfully amplified (TGLA227, BM2113, ETH10, SPS115, TGLA126, TGLA122, INRA23, BM1818, ETH3, ETH225 and BM1824) whereas microsatellite locus TGLA53 was not amplified. Amplicons were resolved by genetic analyzer instrument and gene mapper software. Allele count, frequencies, gene diversity, heterozygosity, polymorphic information content (PIC) and linkage disequilibrium values were calculated by using Microsatellite toolkit v3 and Power Marker version 3.25.
Results: A total of 96 alleles were detected in 196 samples with average of 8.73 alleles per locus and range of 5 alleles (ETH 3) to 18 alleles (ETH 225) per locus. Gene diversity ranged from 0.198 (BM1824) to 0.841 (ETH225), observed heterozygosity values ranged from 0.081 (ETH10) to 0.831 (BM2113) and PIC values ranged from 0.191 (BM1824) to 0.825 (ETH225).
Conclusion: This study which will serve as a baseline to understand genetic dynamics of Nili Ravi buffalo breed. Highly polymorphic nature of STR markers will help in understanding effects of various breed improvements efforts on genetic diversity of Nili Ravi breed in future studies.
Evaluation of a recurrent mutation in HGF gene responsible for non-syndromic hereditary deafness in Kashmiri population
Kalsoom Zaigham, Hamna Tariq, Tanveer Ahmed Qaiser, Saad Bin Maqsood, Asma Ali Khan, pages 281-286
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Methods: Kashmiri families were enrolled from different divisions of Azad Jammu and Kashmir. By employing linkage analysis all the families were screened for loci common in Pakistani population. Families linked with DFNB39 locus were subjected to direct sequencing for mutational analysis of variants prevalent in Pakistani population.
Results: Sanger sequencing identified a noncoding c.482+1986_1988delTGA variant of HGF as recurrent mutation in Kashmiri population. These findings implicate this HGF variant as major contributing variant of hearing impairment in Kashmiri families with a frequency of 8.8%.
Conclusion: This is the first study conducted to elucidate the founder effect and prevalence of HGF variants in Kashmiri population. This study increases the prevalence of HGF variants associated with hearing impairment in the Kashmiri families.